Features
The PGx Variant Detection and Recommendation algorithm identifies pharmacogenomic diplotypes and annotates them with drug recommendations. By default, diplotypes are annotated against recommendations provided by the Clinical Pharmacogenetics Implementation Consortium (CPIC).
Identify Alleles
Identifying the named alleles present at all positions required according to the CPIC guidelines to define a diplotype for a given gene.
Matching to Recommendations
Once diplotypes have been assigned for each gene, VSPGx matches these diplotypes to phenotypes and recommendations.
Structural Variations
PGx Variant Detection and Recommendation algorithm can be used to report on phenotypic data and treatment recommendations for structural variations and copy number deletions or duplications.
Reporting
After running PGx Variant Detection and Recommendations, a clinical report can be generated using VSPGX's customizable reporting system. VSPGX comes shipped with an initial PGx Word®-based report template that serves as a starting point for creating custom reports.
Recommended Learning Materials
We have a variety of materials for anyone interested in the industry or our software solutions. Here are some of our recommended materials for you to check out related to VSPGx!
Webcasts
Watch our webcast unveiling VSPGx.
Introducing VSPGx: Pharmacogenomics Testing in VarSeq
Watch NowOther Resources
Explore a clinical workflow in VarSeq or follow along with a VS-CNV tutorial!
VarSeq Viewer:
Download Here
VS-CNV Caller Tutorial:
Download Here
Try VSPGx for Free
Did you know we offer complimentary trials of our software? No restricted features, no sample data - you get to try all the features of VSPGx with your data and see how it works!
If you are interested in a trial, please fill out the form below, and we will send you the details!
Technical Specifications
VarSeq offers flexible deployment options to match your infrastructure needs. Deploy on local workstations, servers with remote desktop access, or leverage our new "bring your own cloud" model using provided scripts for automated cloud deployment.
The software operates securely within corporate networks, supporting web proxy configurations and maintaining minimal internet connectivity requirements. Connections to Golden Helix servers are limited to essential functions like license verification and annotation updates.
See System Requirements for more details of hardware and operating systems requirements based on planned workflows.