Your partner for all
NGS workflows

Panels to Exomes to Genomes
Labs to Regional Hospitals to Genome Centers
Germline to Prenatal to Oncology

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Scalable NGS Analysis for Hospitals and Clinical Labs

Streamline and scale your lab with our comprehensive variant interpretation platform, backed by unparalleled support and a client-centric approach. Use our innovative, scalable, and automated solutions to enable precision medicine at your institution.

Institutions
400+
Years in Business
25+
Product Installs
40,000+

Software to power your NGS testing workflows.

Variant annotation, filtering, interpretation, and reporting in an integrated package. Scale your tests and your volume with our automation and data warehousing.

VarSeq and VS-CNV

Repeatable variant annotation and filtering workflows and target-based CNV calling

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VSClinical and VSReports

Industry standard ACMG and AMP guidelines for variant scoring and clinical evidence reporting

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VSWarehouse and VSPipeline

Automate workfows and warehousing, enabling continuous improvement and curated insights

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Fixed pricing, no per-sample charges

Our business model is simple. One annual bundle, no matter how many samples come through your lab.

Our Difference

Featured webinar

Maximizing Profitability in Your NGS Testing Lab

Experience the benefits of automating clinical NGS workflows with Golden Helix software, reducing report production time, minimizing human error, and enhancing precision. Our fixed annual subscription model streamlines the entire analysis process, from sequencer to clinical report, maximizing profitability and efficiency in your NGS testing lab.

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Trusted by businesses worldwide.

Our software takes a user-centric approach to enable complex workflows to be done repeatedly and efficiently. Users praise the streamlined experience, time savings, and repeatability.

We are impressed by the ease of whole genome assay validation.

Head of Bioinformatics

We use Golden Helix training materials as our day bible running routine diagnostics.

Chief Data Officer

We are amazed that the analysis of cancer and germline samples is possible within one product.

Lab Director

Golden Helix's Clinical Reporting is better than anything we tested.

Bioinformatician

We are impressed by the visualization capabilities of VarSeq.

Clinical Geneticist

The excellent support and training are a big reason we decided to go with Golden Helix.

Director of Genomics Core

Golden Helix provides a market-ready solution for whole exome sequence analysis in a clinical lab.

Martin Larsen - Associate Professor and Bioinformatician

My special thanks to the FAS team for their excellent support in helping us to design in-house workflows.

Head Analyst

VarSeq stood out during our initial round of evaluations, with all its tools integrated into one workflow.

Konstanze Hörtnagel - Deputy Head of Human Genetics

The bioinformatic freedom is without parallels.

Lead Geneticist

VarSeq is the best in the market. And for new features, the Development Team is always open for suggestions.

Head of Bioinformatics

VarSeq is like so many birthday presents for my lab in one package!

Clinical Director

We are impressed by the ease of whole genome assay validation.

Head of Bioinformatics

We use Golden Helix training materials as our day bible running routine diagnostics.

Chief Data Officer

We are amazed that the analysis of cancer and germline samples is possible within one product.

Lab Director

Golden Helix's Clinical Reporting is better than anything we tested.

Bioinformatician

We are impressed by the visualization capabilities of VarSeq.

Clinical Geneticist

The excellent support and training are a big reason we decided to go with Golden Helix.

Director of Genomics Core

Golden Helix provides a market-ready solution for whole exome sequence analysis in a clinical lab.

Martin Larsen - Associate Professor and Bioinformatician

My special thanks to the FAS team for their excellent support in helping us to design in-house workflows.

Head Analyst

VarSeq stood out during our initial round of evaluations, with all its tools integrated into one workflow.

Konstanze Hörtnagel - Deputy Head of Human Genetics

The bioinformatic freedom is without parallels.

Lead Geneticist

VarSeq is the best in the market. And for new features, the Development Team is always open for suggestions.

Head of Bioinformatics

VarSeq is like so many birthday presents for my lab in one package!

Clinical Director

We use Golden Helix training materials as our day bible running routine diagnostics.

Chief Data Officer

VarSeq is like so many birthday presents for my lab in one package!

Clinical Director

My special thanks to the FAS team for their excellent support in helping us to design in-house workflows.

Head Analyst

VarSeq is the best in the market. And for new features, the Development Team is always open for suggestions.

Head of Bioinformatics

We are impressed by the visualization capabilities of VarSeq.

Clinical Geneticist

The bioinformatic freedom is without parallels.

Lead Geneticist

Golden Helix provides a market-ready solution for whole exome sequence analysis in a clinical lab.

Martin Larsen - Associate Professor and Bioinformatician

We are impressed by the ease of whole genome assay validation.

Head of Bioinformatics

We are amazed that the analysis of cancer and germline samples is possible within one product.

Lab Director

VarSeq stood out during our initial round of evaluations, with all its tools integrated into one workflow.

Konstanze Hörtnagel - Deputy Head of Human Genetics

The excellent support and training are a big reason we decided to go with Golden Helix.

Director of Genomics Core

Golden Helix's Clinical Reporting is better than anything we tested.

Bioinformatician

News, Events and Genomic Deep Dives

Our blog is a rich and current feed of product tips, genomic deep dives and company announcements.

Read the Blog

Golden Helix Partners with the Danish Healthcare Regions to Drive Advancements in Genomic Medicine

Golden Helix, a global leader in bioinformatics solutions for Next-Generation Sequencing (NGS) and precision medicine, is proud to announce a multi-year agreement with all Danish healthcare regions. The agreement aims to enhance the genomic capabilities of multiple laboratories within the regions, supporting critical advancements in cancer and hereditary disease diagnostics. In a unified effort across Denmark’s healthcare regions, the laboratories… Read more »

Don’t Miss MITOMAP for Mitochondrial Variant Analysis in VarSeq

Mitochondrial diseases, caused by mutations in mitochondrial DNA (mtDNA), represent a complex and diverse group of disorders. These conditions often affect organs with high-energy demands, such as the brain, heart, and muscles. Identifying mitochondrial DNA variants and understanding their clinical relevance is essential for diagnosing and treating these diseases. One of the most valuable resources in mitochondrial variant analysis is… Read more »

VarSeq 2.6.2 is Released!

I am pleased to announce that VarSeq 2.6.2 is now available! VarSeq 2.6.2 comes jammed-packed with new features and capabilities to advance your NGS analysis workflows. In this blog, I will describe the major changes to the VSPGx workflow, which were the main focus of the release, and I will also talk about other exciting features and new algorithms that… Read more »