From FASTQ to Clinical Report

We provide a complete, end-to-end solution for clinical labs and hospitals to analyze Next-Generation Sequencing data.

Enter our Abstract Competition - Ends Jan. 30, 2019

All testing labs, hospital labs, academic, government or commercial organizations who are Golden Helix users are invited to apply. We would love to hear how you are using Golden Helix software in your clinical or research work. Do you use NGS analysis to treat patients? Do you have a particular disease category focus? Or are you zeroing in on a specific population? How do you leverage the ACMG guidelines into your clinical workflow? Do you work with CNVs? How do you leverage our research platform for plants, animals or humans?

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PROVEN

In business for 20 years and cited in 1,300+ publications, we are proud to support over 10,000 users in more than 400 institutions worldwide.


INTEGRATED

Our entire clinical pipeline consists of software products that are deeply integrated with each other. In addition, we provide automation capabilities that are crucial in high-throughput testing environments.


VALUE

No per-sample charges! You will save money with our annual subscription model. Licenses include unlimited training and support to ensure success.



Popular Products



SNP & Variation Suite

SNP & Variation Suite is a powerful analytic tool that allows biologists and other researchers to easily perform complex analyses and visualizations on genomic and phenotypic data.

  • GWAS & SNP Analysis
  • Large-N DNA-Seq Analysis
  • Genomic Prediction
  • Copy Number Analysis
  • RNA-Seq Analysis

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VarSeq

VarSeq is an intuitive, integrated software solution for tertiary analysis. With VarSeq you can automate your workflows and analyze variants for gene panels, exomes, and whole genomes.

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VarSeq

Built on the same algorithms of Varseq, VSWarehouse is a scalable, multi-project warehouse for NGS variant call sets, clinical reports, and catalogs of variant assessments.

  • Fully Integrated with VarSeq Workflows
  • Scalable Technology
  • Organize Samples into Projects
  • Centralized Clinical Report Hosting
  • Create Variant Assessment Catalogs

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Support for Various Industries


Customer Testimonials


Jeffrey Rosenfeld, Ph.D

Rutgers Cancer Institute of New Jersey

Dr. Jeffrey Rosenfeld, Bioinformatics Scientist


“Being an informatics person, my job is to set the system up. Now that it’s up and running the molecular pathologist can run the samples. They do not need an informatics person to run every sample.”


Read Rosenfeld's Case Study


Benjamin Darbo, Ph.D

University of Iowa

Dr. Benjamin Darbro, Director of Shivanand R. Patil Cytogenetics and Molecular Laboratory

“VarSeq had everything we were looking for with regards to annotation, filtering sources and an actual visual browser within the software itself. However, what really set it apart in retrospect is how intuitive it is.”


Read Darbro's Case Study


Heather Huson, Ph.D

Cornell University

Dr. Heather Huson, Professor of Dairy Cattle Genetics, Odyssey DNA Lab

"The huge benefit of SVS is it's user-friendly, and you can basically visualize your results in the same program. You don't have to spend nearly as much time manipulating data and results to get it in the right input and output formats."

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Hela Azaiez, Ph.D

University of Iowa

Dr. Hela Azaiez, Associate Research Scientist, Molecular Otolaryngology and Renal Research Laboratories

“SVS opened so many doors for my research. It allowed me to explore new ideas. It allowed me to do stuff I never thought was even possible to do in that amount of time so that I could test so many hypotheses. All that I had to do is click a button.”


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Rick Kittles, Ph.D

University of Arizona

Dr. Rick Kittles, Director, Center for Population Genetics

"SVS goes beyond simple genotype associations with Identity By Descent (IBD) calculations, principal component analysis, and the ability to visualize results, all in one application. So when people say 'It costs money,' I say it's better to have one program that can do everything than to look for updates on multiple applications all the time."

Read Kittle's Case Study


Recent Webcast

New & Improved COSMIC Database for NGS Cancer Analyses

January 9, 2019 | 12:00 PM EST

Presented by: Darby Kammeraad, Field Application Scientist Manager

With Next-Gen Sequencing becoming a routine method of rapidly investigating cancer mutations, having access to accurate and large somatic variant catalogs is paramount. We at Golden Helix are excited to announce our newly released COSMIC 87 track. This updated version of the world's largest and most comprehensive somatic track provides a number of significant improvements. This includes not only an increase of ~1.1 million variants but also improvements on evidence accessibility and as always...